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Home/Compounds/Pharmaceutical Intermediate/N-Benzoyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-5-methyl-cytidine 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]
C47H54N5O8P
847.9 g/mol
Pharmaceutical IntermediateWarning

Cytidine, N-benzoyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-5-methyl-, 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]

CAS105931-57-5
Category
Pharmaceutical Intermediate
Compound Class
Heterocycle
Primary Use
Pharmaceutical Intermediate

This compound is a protected deoxyribonucleoside phosphoramidite, featuring a dimethoxytrityl (DMT) protecting group and a cyanoethyl phosphoramidite moiety. It is primarily used as a building block in automated DNA synthesis, enabling the incorporation of thymidine derivatives into oligonucleotide chains.

DNA synthesis building blockPharmaceutical intermediate for oligonucleotide manufacturing

Content scope: Information here supports chemical identification and industrial supply, research, and manufacturing contexts. It is not a therapeutic claim, medical advice, or drug-use instructions.

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CAS 105931-57-5

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Related Compounds

SimilarStructure SimilarSimilarity 0.81

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N-Benzoyl-5'-O-(4,4'-dimethoxytrityl)-3'-O-((2-cyanoethoxy)(diisopropylamino)phosphino)-2'-O-(2-methoxyethyl)-5-methylcytidine

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5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-deoxy-N-[6((1,4

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Safety Reference

Harmful
Harmful
Warning
H302Harmful if swallowed
Identifiers
IUPAC Name

N-[1-[(2R,4S,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-2-yl]-5-methyl-2-oxopyrimidin-4-yl]benzamide

InChIKey

AGMUHEZFYUECLW-QUZMAVINSA-N

SMILES

CC1=CN(C(=O)N=C1NC(=O)C2=CC=CC=C2)[C@H]3C[C@@H]([C@H](O3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC)OP(N(C(C)C)C(C)C)OCCC#N

Synonyms (15)

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